Plant Pathogenomics for a Sustainable Future of Food
June 23 - 27, 2025 Bologna
The 2P4S2F Summer School offers early-career researchers, PhD students, and postdocs a comprehensive training experience in plant pathogenomics, combining cutting-edge lectures with hands-on bioinformatics workshops over five days.
Participants will explore genomic approaches to studying plant-interacting microorganisms, both pathogenic and beneficial, and their role in plant health and agricultural sustainability.
Each morning will feature two plenary lectures by leading international scientists, covering breakthroughs in fungal and microbial genomics.The afternoons will be dedicated to practical bioinformatics training, equipping participants with essential genomic data analysis skills.
Plenary Lectures
The program includes eight plenary talks on key topics such as:
- Whole-genome sequencing for microbial characterization
- Transposable elements and microbial adaptation
- Comparative genomics in host-microbe interactions
- Functional genomics of pathogenicity and beneficial traits
Hands-on Bioinformatics Training
Afternoon workshops will focus on:
- Experimental design and sequencing techniques
- Quality control of high-throughput sequencing data
- Genome assembly using short- and long-read technologies
- Comparative analysis of genome assemblies
- Gene prediction and functional annotation
- Differential gene expression (depending on the time constrains)
Participants will have the unique opportunity to sequence their own microbial sample!
Each selected participant will provide a sample for whole-genome sequencing, and the resulting data will be used during the workshops.
Why Attend?
- Gain hands-on experience with your own genomic dataset
- Develop essential bioinformatics skills
- Network with leading experts and fellow researchers
- Enjoy the academic and cultural atmosphere of Bologna
Instructors
Cost & Application
Fee: €750 ( includes training, sequencing of one sample, coffee breaks, lunches, and social dinner )
The sequencing cost is fully covered by the registration fee
Limited to 40 participants to ensure an interactive learning experience
Selection via online application
Important Deadlines
Application: by April 20th, 2025
Registration: by April 30st, 2025
DNA sample delivery: by May 15th, 2025